Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
RpgrQ9R0X5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RpgrQ9R0X5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RpgrQ9R0X5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RpgrQ9R0X5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RpgrQ9R0X5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RpgrQ9R0X5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RpgrQ9R0X5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
RpgrQ9R0X5 Gm15546-201ENSMUST00000122095 826 ntBASIC20.63■□□□□ 0.89
RpgrQ9R0X5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RpgrQ9R0X5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.62■□□□□ 0.89
RpgrQ9R0X5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RpgrQ9R0X5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RpgrQ9R0X5 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.62■□□□□ 0.89
RpgrQ9R0X5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RpgrQ9R0X5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RpgrQ9R0X5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RpgrQ9R0X5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RpgrQ9R0X5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RpgrQ9R0X5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RpgrQ9R0X5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.59■□□□□ 0.89
RpgrQ9R0X5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RpgrQ9R0X5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RpgrQ9R0X5 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms