Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim39Q9ESN2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim39Q9ESN2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim39Q9ESN2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim39Q9ESN2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim39Q9ESN2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim39Q9ESN2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.02■□□□□ 0.64
Trim39Q9ESN2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim39Q9ESN2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.02■□□□□ 0.63
Trim39Q9ESN2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim39Q9ESN2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim39Q9ESN2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim39Q9ESN2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim39Q9ESN2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim39Q9ESN2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trim39Q9ESN2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim39Q9ESN2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim39Q9ESN2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.99■□□□□ 0.63
Trim39Q9ESN2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim39Q9ESN2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim39Q9ESN2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim39Q9ESN2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim39Q9ESN2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Gm43566-201ENSMUST00000196851 808 ntBASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim39Q9ESN2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim39Q9ESN2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim39Q9ESN2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim39Q9ESN2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim39Q9ESN2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Trim39Q9ESN2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim39Q9ESN2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 909.8 ms