Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.19■□□□□ 0.82
Rrp8Q9DB85 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.19■□□□□ 0.82
Rrp8Q9DB85 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Gm12251-201ENSMUST00000117893 792 ntBASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rrp8Q9DB85 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.17■□□□□ 0.82
Rrp8Q9DB85 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Gm26833-201ENSMUST00000180899 440 ntBASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Gm43530-201ENSMUST00000195920 274 ntBASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rrp8Q9DB85 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rrp8Q9DB85 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rrp8Q9DB85 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Rrp8Q9DB85 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rrp8Q9DB85 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rrp8Q9DB85 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rrp8Q9DB85 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Gm29257-201ENSMUST00000186115 639 ntBASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rrp8Q9DB85 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Spcs1-204ENSMUST00000226782 949 ntBASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
Rrp8Q9DB85 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.12■□□□□ 0.81
Rrp8Q9DB85 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.11■□□□□ 0.81
Rrp8Q9DB85 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Gm43060-201ENSMUST00000200621 289 ntBASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp8Q9DB85 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp8Q9DB85 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rrp8Q9DB85 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.09■□□□□ 0.81
Rrp8Q9DB85 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms