Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg3Q9CQV4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg3Q9CQV4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg3Q9CQV4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg3Q9CQV4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retreg3Q9CQV4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Retreg3Q9CQV4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.64■□□□□ 0.9
Retreg3Q9CQV4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg3Q9CQV4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
Retreg3Q9CQV4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg3Q9CQV4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.63■□□□□ 0.89
Retreg3Q9CQV4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg3Q9CQV4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg3Q9CQV4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg3Q9CQV4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg3Q9CQV4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg3Q9CQV4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg3Q9CQV4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg3Q9CQV4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.62■□□□□ 0.89
Retreg3Q9CQV4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg3Q9CQV4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg3Q9CQV4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Retreg3Q9CQV4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg3Q9CQV4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retreg3Q9CQV4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retreg3Q9CQV4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg3Q9CQV4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg3Q9CQV4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg3Q9CQV4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.59■□□□□ 0.89
Retreg3Q9CQV4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg3Q9CQV4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg3Q9CQV4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.59■□□□□ 0.89
Retreg3Q9CQV4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.59■□□□□ 0.89
Retreg3Q9CQV4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg3Q9CQV4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg3Q9CQV4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Retreg3Q9CQV4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg3Q9CQV4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.58■□□□□ 0.89
Retreg3Q9CQV4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Retreg3Q9CQV4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg3Q9CQV4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.58■□□□□ 0.88
Retreg3Q9CQV4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg3Q9CQV4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg3Q9CQV4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg3Q9CQV4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg3Q9CQV4 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms