Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm7Q9CQQ8 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.79■□□□□ 0.92
Lsm7Q9CQQ8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm7Q9CQQ8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm7Q9CQQ8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm7Q9CQQ8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm7Q9CQQ8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm7Q9CQQ8 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.77■□□□□ 0.92
Lsm7Q9CQQ8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm7Q9CQQ8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.77■□□□□ 0.92
Lsm7Q9CQQ8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
Lsm7Q9CQQ8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm7Q9CQQ8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm7Q9CQQ8 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.77■□□□□ 0.91
Lsm7Q9CQQ8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Lsm7Q9CQQ8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Gm27454-201ENSMUST00000185090 204 ntBASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm7Q9CQQ8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm7Q9CQQ8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm7Q9CQQ8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.73■□□□□ 0.91
Lsm7Q9CQQ8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm7Q9CQQ8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm7Q9CQQ8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm7Q9CQQ8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm7Q9CQQ8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm7Q9CQQ8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm7Q9CQQ8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lsm7Q9CQQ8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm7Q9CQQ8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms