Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.93■■□□□ 1.1
Pcdha9Q91Y11 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha9Q91Y11 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.93■■□□□ 1.1
Pcdha9Q91Y11 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha9Q91Y11 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha9Q91Y11 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha9Q91Y11 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Pcdha9Q91Y11 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Pcdha9Q91Y11 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha9Q91Y11 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.89■■□□□ 1.1
Pcdha9Q91Y11 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha9Q91Y11 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha9Q91Y11 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha9Q91Y11 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Gm9870-201ENSMUST00000063874 645 ntBASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha9Q91Y11 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha9Q91Y11 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Pcdha9Q91Y11 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha9Q91Y11 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha9Q91Y11 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha9Q91Y11 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha9Q91Y11 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha9Q91Y11 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha9Q91Y11 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha9Q91Y11 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha9Q91Y11 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdha9Q91Y11 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha9Q91Y11 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.84■■□□□ 1.09
Pcdha9Q91Y11 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha9Q91Y11 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha9Q91Y11 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha9Q91Y11 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Pcdha9Q91Y11 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha9Q91Y11 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha9Q91Y11 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdha9Q91Y11 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha9Q91Y11 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha9Q91Y11 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.81■■□□□ 1.08
Pcdha9Q91Y11 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha9Q91Y11 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha9Q91Y11 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha9Q91Y11 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha9Q91Y11 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha9Q91Y11 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.8■■□□□ 1.08
Pcdha9Q91Y11 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.8■■□□□ 1.08
Pcdha9Q91Y11 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms