Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf8Q8VC56 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf8Q8VC56 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf8Q8VC56 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf8Q8VC56 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf8Q8VC56 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.63■□□□□ 0.73
Rnf8Q8VC56 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf8Q8VC56 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Gm10232-201ENSMUST00000089221 720 ntBASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf8Q8VC56 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf8Q8VC56 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf8Q8VC56 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf8Q8VC56 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rnf8Q8VC56 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.6■□□□□ 0.73
Rnf8Q8VC56 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf8Q8VC56 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.59■□□□□ 0.73
Rnf8Q8VC56 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf8Q8VC56 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf8Q8VC56 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf8Q8VC56 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf8Q8VC56 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf8Q8VC56 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms