Protein–RNA interactions for Protein: Q8N5C6

SRBD1, S1 RNA-binding domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 995 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRBD1Q8N5C6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SRBD1Q8N5C6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SRBD1Q8N5C6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SRBD1Q8N5C6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SRBD1Q8N5C6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SRBD1Q8N5C6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.57■■□□□ 1.84
SRBD1Q8N5C6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SRBD1Q8N5C6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 AC093323.1-202ENST00000635031 2045 ntBASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SRBD1Q8N5C6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.54■■□□□ 1.84
SRBD1Q8N5C6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 ALDH1A3-203ENST00000557963 1670 ntBASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.53■■□□□ 1.84
SRBD1Q8N5C6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 MIR6724-1-201ENST00000616420 92 ntBASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 MIR6724-2-201ENST00000616483 92 ntBASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 MIR6724-4-201ENST00000617390 92 ntBASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 MIR6724-3-201ENST00000622482 92 ntBASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SRBD1Q8N5C6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
SRBD1Q8N5C6 ABCB10P4-201ENST00000566803 2184 ntBASIC26.51■■□□□ 1.84
SRBD1Q8N5C6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SRBD1Q8N5C6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.51■■□□□ 1.83
SRBD1Q8N5C6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SRBD1Q8N5C6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SRBD1Q8N5C6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SRBD1Q8N5C6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.5■■□□□ 1.83
SRBD1Q8N5C6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
SRBD1Q8N5C6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SRBD1Q8N5C6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.48■■□□□ 1.83
SRBD1Q8N5C6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.48■■□□□ 1.83
SRBD1Q8N5C6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SRBD1Q8N5C6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SRBD1Q8N5C6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SRBD1Q8N5C6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.47■■□□□ 1.83
SRBD1Q8N5C6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SRBD1Q8N5C6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.47■■□□□ 1.83
SRBD1Q8N5C6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SRBD1Q8N5C6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SRBD1Q8N5C6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms