Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.26■□□□□ 0.83
Treml1Q8K558 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.26■□□□□ 0.83
Treml1Q8K558 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Treml1Q8K558 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Treml1Q8K558 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml1Q8K558 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Treml1Q8K558 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Treml1Q8K558 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml1Q8K558 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Treml1Q8K558 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Treml1Q8K558 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Treml1Q8K558 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Treml1Q8K558 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Treml1Q8K558 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Treml1Q8K558 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Treml1Q8K558 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
Treml1Q8K558 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Treml1Q8K558 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Treml1Q8K558 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.22■□□□□ 0.83
Treml1Q8K558 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Treml1Q8K558 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Treml1Q8K558 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Treml1Q8K558 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.22■□□□□ 0.83
Treml1Q8K558 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Treml1Q8K558 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Treml1Q8K558 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.22■□□□□ 0.83
Treml1Q8K558 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Treml1Q8K558 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Treml1Q8K558 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml1Q8K558 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml1Q8K558 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml1Q8K558 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.21■□□□□ 0.83
Treml1Q8K558 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.21■□□□□ 0.83
Treml1Q8K558 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml1Q8K558 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml1Q8K558 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml1Q8K558 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Treml1Q8K558 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml1Q8K558 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml1Q8K558 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.2■□□□□ 0.82
Treml1Q8K558 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml1Q8K558 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml1Q8K558 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Treml1Q8K558 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml1Q8K558 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml1Q8K558 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Treml1Q8K558 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.19■□□□□ 0.82
Treml1Q8K558 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Treml1Q8K558 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml1Q8K558 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Treml1Q8K558 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml1Q8K558 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml1Q8K558 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.19■□□□□ 0.82
Treml1Q8K558 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml1Q8K558 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
Treml1Q8K558 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml1Q8K558 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Treml1Q8K558 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Treml1Q8K558 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Treml1Q8K558 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Treml1Q8K558 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Treml1Q8K558 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Treml1Q8K558 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Treml1Q8K558 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml1Q8K558 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml1Q8K558 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml1Q8K558 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Treml1Q8K558 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml1Q8K558 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Treml1Q8K558 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml1Q8K558 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml1Q8K558 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Treml1Q8K558 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Treml1Q8K558 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Treml1Q8K558 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.15■□□□□ 0.82
Treml1Q8K558 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.15■□□□□ 0.82
Treml1Q8K558 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Treml1Q8K558 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Treml1Q8K558 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.14■□□□□ 0.81
Treml1Q8K558 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms