Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcll1Q8JZS7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgcll1Q8JZS7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgcll1Q8JZS7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.28■■□□□ 1
Hmgcll1Q8JZS7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmgcll1Q8JZS7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgcll1Q8JZS7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgcll1Q8JZS7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgcll1Q8JZS7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hmgcll1Q8JZS7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hmgcll1Q8JZS7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcll1Q8JZS7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.26■□□□□ 0.99
Hmgcll1Q8JZS7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hmgcll1Q8JZS7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hmgcll1Q8JZS7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcll1Q8JZS7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcll1Q8JZS7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hmgcll1Q8JZS7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcll1Q8JZS7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcll1Q8JZS7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Hmgcll1Q8JZS7 Gm45417-201ENSMUST00000209533 758 ntBASIC21.24■□□□□ 0.99
Hmgcll1Q8JZS7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmgcll1Q8JZS7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Gm43530-201ENSMUST00000195920 274 ntBASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hmgcll1Q8JZS7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgcll1Q8JZS7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgcll1Q8JZS7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hmgcll1Q8JZS7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.2■□□□□ 0.98
Hmgcll1Q8JZS7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
Hmgcll1Q8JZS7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms