Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ShfQ8CG80 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.37■□□□□ 0.53
ShfQ8CG80 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.37■□□□□ 0.53
ShfQ8CG80 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShfQ8CG80 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ShfQ8CG80 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ShfQ8CG80 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ShfQ8CG80 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.36■□□□□ 0.53
ShfQ8CG80 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.36■□□□□ 0.53
ShfQ8CG80 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShfQ8CG80 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ShfQ8CG80 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.35■□□□□ 0.53
ShfQ8CG80 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShfQ8CG80 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShfQ8CG80 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ShfQ8CG80 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShfQ8CG80 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.34■□□□□ 0.53
ShfQ8CG80 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.34■□□□□ 0.53
ShfQ8CG80 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ShfQ8CG80 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShfQ8CG80 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShfQ8CG80 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ShfQ8CG80 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ShfQ8CG80 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShfQ8CG80 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ShfQ8CG80 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShfQ8CG80 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.33■□□□□ 0.52
ShfQ8CG80 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShfQ8CG80 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ShfQ8CG80 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShfQ8CG80 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ShfQ8CG80 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.32■□□□□ 0.52
ShfQ8CG80 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ShfQ8CG80 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.32■□□□□ 0.52
ShfQ8CG80 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShfQ8CG80 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
ShfQ8CG80 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ShfQ8CG80 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ShfQ8CG80 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ShfQ8CG80 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.31■□□□□ 0.52
ShfQ8CG80 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.31■□□□□ 0.52
ShfQ8CG80 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.31■□□□□ 0.52
ShfQ8CG80 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShfQ8CG80 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ShfQ8CG80 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ShfQ8CG80 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ShfQ8CG80 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShfQ8CG80 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ShfQ8CG80 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ShfQ8CG80 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.29■□□□□ 0.52
ShfQ8CG80 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ShfQ8CG80 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShfQ8CG80 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShfQ8CG80 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ShfQ8CG80 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.29■□□□□ 0.52
ShfQ8CG80 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.29■□□□□ 0.52
ShfQ8CG80 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.29■□□□□ 0.52
ShfQ8CG80 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms