Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.67■□□□□ 0.9
Ppp4r4Q8C0Y0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ppp4r4Q8C0Y0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.66■□□□□ 0.9
Ppp4r4Q8C0Y0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ppp4r4Q8C0Y0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ppp4r4Q8C0Y0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.65■□□□□ 0.9
Ppp4r4Q8C0Y0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.65■□□□□ 0.9
Ppp4r4Q8C0Y0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ppp4r4Q8C0Y0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ppp4r4Q8C0Y0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ppp4r4Q8C0Y0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ppp4r4Q8C0Y0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.62■□□□□ 0.89
Ppp4r4Q8C0Y0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.62■□□□□ 0.89
Ppp4r4Q8C0Y0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ppp4r4Q8C0Y0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ppp4r4Q8C0Y0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ppp4r4Q8C0Y0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ppp4r4Q8C0Y0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ppp4r4Q8C0Y0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.59■□□□□ 0.89
Ppp4r4Q8C0Y0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ppp4r4Q8C0Y0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ppp4r4Q8C0Y0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ppp4r4Q8C0Y0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Ppp4r4Q8C0Y0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ppp4r4Q8C0Y0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ppp4r4Q8C0Y0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ppp4r4Q8C0Y0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ppp4r4Q8C0Y0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
Ppp4r4Q8C0Y0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ppp4r4Q8C0Y0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.55■□□□□ 0.88
Ppp4r4Q8C0Y0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ppp4r4Q8C0Y0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ppp4r4Q8C0Y0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ppp4r4Q8C0Y0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms