Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk5rap1Q8BTW8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.52■□□□□ 0.72
Cdk5rap1Q8BTW8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk5rap1Q8BTW8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk5rap1Q8BTW8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.52■□□□□ 0.71
Cdk5rap1Q8BTW8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdk5rap1Q8BTW8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Cdk5rap1Q8BTW8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk5rap1Q8BTW8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk5rap1Q8BTW8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk5rap1Q8BTW8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.5■□□□□ 0.71
Cdk5rap1Q8BTW8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk5rap1Q8BTW8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk5rap1Q8BTW8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm45417-201ENSMUST00000209533 758 ntBASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk5rap1Q8BTW8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk5rap1Q8BTW8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk5rap1Q8BTW8 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdk5rap1Q8BTW8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Gm43530-201ENSMUST00000195920 274 ntBASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdk5rap1Q8BTW8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdk5rap1Q8BTW8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms