Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.93■□□□□ 0.94
Suds3Q8BR65 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Suds3Q8BR65 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Suds3Q8BR65 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Suds3Q8BR65 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Suds3Q8BR65 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Suds3Q8BR65 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Suds3Q8BR65 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Suds3Q8BR65 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.9■□□□□ 0.94
Suds3Q8BR65 Gm45102-201ENSMUST00000207427 857 ntBASIC20.9■□□□□ 0.94
Suds3Q8BR65 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.9■□□□□ 0.94
Suds3Q8BR65 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.9■□□□□ 0.94
Suds3Q8BR65 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Suds3Q8BR65 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Suds3Q8BR65 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Suds3Q8BR65 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Suds3Q8BR65 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Suds3Q8BR65 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.88■□□□□ 0.93
Suds3Q8BR65 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.87■□□□□ 0.93
Suds3Q8BR65 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.87■□□□□ 0.93
Suds3Q8BR65 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Suds3Q8BR65 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Suds3Q8BR65 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Suds3Q8BR65 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.85■□□□□ 0.93
Suds3Q8BR65 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Suds3Q8BR65 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.85■□□□□ 0.93
Suds3Q8BR65 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.84■□□□□ 0.93
Suds3Q8BR65 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Suds3Q8BR65 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Suds3Q8BR65 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Suds3Q8BR65 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Suds3Q8BR65 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Suds3Q8BR65 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.83■□□□□ 0.93
Suds3Q8BR65 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms