Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smndc1Q8BGT7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Smndc1Q8BGT7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smndc1Q8BGT7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smndc1Q8BGT7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smndc1Q8BGT7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smndc1Q8BGT7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smndc1Q8BGT7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smndc1Q8BGT7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.68■□□□□ 0.74
Smndc1Q8BGT7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smndc1Q8BGT7 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smndc1Q8BGT7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smndc1Q8BGT7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Smndc1Q8BGT7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smndc1Q8BGT7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.63■□□□□ 0.73
Smndc1Q8BGT7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smndc1Q8BGT7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.62■□□□□ 0.73
Smndc1Q8BGT7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smndc1Q8BGT7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smndc1Q8BGT7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smndc1Q8BGT7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smndc1Q8BGT7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.61■□□□□ 0.73
Smndc1Q8BGT7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms