Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Npas4Q8BGD7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Npas4Q8BGD7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Npas4Q8BGD7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npas4Q8BGD7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Npas4Q8BGD7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Npas4Q8BGD7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Npas4Q8BGD7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Npas4Q8BGD7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Npas4Q8BGD7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Npas4Q8BGD7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Npas4Q8BGD7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Npas4Q8BGD7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.84■■□□□ 1.09
Npas4Q8BGD7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Npas4Q8BGD7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Npas4Q8BGD7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.83■■□□□ 1.09
Npas4Q8BGD7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.83■■□□□ 1.09
Npas4Q8BGD7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Npas4Q8BGD7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Npas4Q8BGD7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.83■■□□□ 1.08
Npas4Q8BGD7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Npas4Q8BGD7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.83■■□□□ 1.08
Npas4Q8BGD7 Gm43060-201ENSMUST00000200621 289 ntBASIC21.82■■□□□ 1.08
Npas4Q8BGD7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npas4Q8BGD7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npas4Q8BGD7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Npas4Q8BGD7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.82■■□□□ 1.08
Npas4Q8BGD7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.81■■□□□ 1.08
Npas4Q8BGD7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Npas4Q8BGD7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npas4Q8BGD7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npas4Q8BGD7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Npas4Q8BGD7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Npas4Q8BGD7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Npas4Q8BGD7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npas4Q8BGD7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Npas4Q8BGD7 Gm10493-201ENSMUST00000097270 612 ntBASIC21.78■■□□□ 1.08
Npas4Q8BGD7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npas4Q8BGD7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npas4Q8BGD7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Npas4Q8BGD7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Npas4Q8BGD7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Npas4Q8BGD7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.77■■□□□ 1.08
Npas4Q8BGD7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Npas4Q8BGD7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Npas4Q8BGD7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Npas4Q8BGD7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Npas4Q8BGD7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Gm29257-201ENSMUST00000186115 639 ntBASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Npas4Q8BGD7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Npas4Q8BGD7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms