Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 HLA-L-209ENST00000420110 1011 ntBASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 SLC6A10P-202ENST00000431994 2058 ntBASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS13BQ7Z7G8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L2-201ENST00000561772 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L6-201ENST00000626483 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L1-201ENST00000627662 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L8-201ENST00000629013 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L3-201ENST00000630187 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L7-201ENST00000630678 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 DUX4L5-201ENST00000630834 1275 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 C17orf82-201ENST00000623772 1530 ntBASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13BQ7Z7G8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13BQ7Z7G8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 AC136469.2-201ENST00000623944 1028 ntBASIC14.27□□□□□ -0.12
VPS13BQ7Z7G8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS13BQ7Z7G8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13BQ7Z7G8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13BQ7Z7G8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS13BQ7Z7G8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13BQ7Z7G8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13BQ7Z7G8 AC004911.1-201ENST00000416316 871 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 AC011298.3-201ENST00000615796 283 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 TSPY26P-201ENST00000476365 1326 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 AC006455.2-201ENST00000429931 906 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 MIR6722-201ENST00000617286 78 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 AC027612.3-201ENST00000413684 1047 ntBASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13BQ7Z7G8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 AL137784.2-201ENST00000607332 1000 ntBASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 AC131274.2-201ENST00000580697 1507 ntBASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms