Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Gm45417-201ENSMUST00000209533 758 ntBASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubfd1Q78JW9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubfd1Q78JW9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubfd1Q78JW9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.05■□□□□ 0.8
Ubfd1Q78JW9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ubfd1Q78JW9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.05■□□□□ 0.8
Ubfd1Q78JW9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ubfd1Q78JW9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubfd1Q78JW9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ubfd1Q78JW9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubfd1Q78JW9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Ubfd1Q78JW9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubfd1Q78JW9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubfd1Q78JW9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubfd1Q78JW9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubfd1Q78JW9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Ubfd1Q78JW9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubfd1Q78JW9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubfd1Q78JW9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubfd1Q78JW9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubfd1Q78JW9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubfd1Q78JW9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ubfd1Q78JW9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubfd1Q78JW9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubfd1Q78JW9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubfd1Q78JW9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubfd1Q78JW9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubfd1Q78JW9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.97■□□□□ 0.79
Ubfd1Q78JW9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ubfd1Q78JW9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.97■□□□□ 0.79
Ubfd1Q78JW9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms