Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sdc3Q64519 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Sdc3Q64519 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.66■□□□□ 0.74
Sdc3Q64519 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sdc3Q64519 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Sdc3Q64519 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc3Q64519 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc3Q64519 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc3Q64519 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.65■□□□□ 0.74
Sdc3Q64519 Gm21956-201ENSMUST00000179946 522 ntBASIC19.65■□□□□ 0.74
Sdc3Q64519 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sdc3Q64519 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc3Q64519 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc3Q64519 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc3Q64519 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sdc3Q64519 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc3Q64519 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.64■□□□□ 0.73
Sdc3Q64519 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc3Q64519 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sdc3Q64519 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.64■□□□□ 0.73
Sdc3Q64519 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc3Q64519 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.63■□□□□ 0.73
Sdc3Q64519 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.63■□□□□ 0.73
Sdc3Q64519 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
Sdc3Q64519 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.63■□□□□ 0.73
Sdc3Q64519 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.63■□□□□ 0.73
Sdc3Q64519 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sdc3Q64519 Gm13241-201ENSMUST00000094493 780 ntBASIC19.63■□□□□ 0.73
Sdc3Q64519 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sdc3Q64519 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc3Q64519 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.62■□□□□ 0.73
Sdc3Q64519 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.62■□□□□ 0.73
Sdc3Q64519 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc3Q64519 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc3Q64519 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc3Q64519 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.61■□□□□ 0.73
Sdc3Q64519 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc3Q64519 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc3Q64519 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc3Q64519 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.6■□□□□ 0.73
Sdc3Q64519 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc3Q64519 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc3Q64519 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.6■□□□□ 0.73
Sdc3Q64519 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.6■□□□□ 0.73
Sdc3Q64519 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc3Q64519 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sdc3Q64519 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sdc3Q64519 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc3Q64519 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sdc3Q64519 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Sdc3Q64519 Gm15039-201ENSMUST00000118914 875 ntBASIC19.59■□□□□ 0.73
Sdc3Q64519 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc3Q64519 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc3Q64519 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc3Q64519 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc3Q64519 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Sdc3Q64519 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdc3Q64519 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdc3Q64519 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdc3Q64519 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Sdc3Q64519 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sdc3Q64519 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc3Q64519 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc3Q64519 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sdc3Q64519 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc3Q64519 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc3Q64519 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sdc3Q64519 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.57■□□□□ 0.72
Sdc3Q64519 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc3Q64519 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc3Q64519 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms