Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.07■□□□□ 0.48
Traf4Q61382 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Traf4Q61382 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Traf4Q61382 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Traf4Q61382 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Traf4Q61382 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Traf4Q61382 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Traf4Q61382 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Traf4Q61382 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Traf4Q61382 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Traf4Q61382 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Traf4Q61382 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Traf4Q61382 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Traf4Q61382 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Traf4Q61382 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.04■□□□□ 0.48
Traf4Q61382 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.04■□□□□ 0.48
Traf4Q61382 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Traf4Q61382 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Traf4Q61382 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.03■□□□□ 0.48
Traf4Q61382 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Traf4Q61382 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Traf4Q61382 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Traf4Q61382 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Traf4Q61382 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Traf4Q61382 Gm13241-201ENSMUST00000094493 780 ntBASIC18.03■□□□□ 0.48
Traf4Q61382 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.03■□□□□ 0.48
Traf4Q61382 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Traf4Q61382 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Traf4Q61382 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Traf4Q61382 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Traf4Q61382 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.01■□□□□ 0.47
Traf4Q61382 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Traf4Q61382 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Gm9847-201ENSMUST00000052528 599 ntBASIC18■□□□□ 0.47
Traf4Q61382 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Traf4Q61382 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.99■□□□□ 0.47
Traf4Q61382 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Traf4Q61382 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Traf4Q61382 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Golph3-202ENSMUST00000226517 2359 ntBASIC17.98■□□□□ 0.47
Traf4Q61382 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Traf4Q61382 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Traf4Q61382 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Traf4Q61382 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Traf4Q61382 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Traf4Q61382 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Traf4Q61382 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Traf4Q61382 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms