Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.15■□□□□ 0.98
Slc6a4Q60857 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.15■□□□□ 0.98
Slc6a4Q60857 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a4Q60857 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a4Q60857 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Slc6a4Q60857 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Slc6a4Q60857 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a4Q60857 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a4Q60857 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a4Q60857 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a4Q60857 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a4Q60857 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Gm12821-201ENSMUST00000120022 600 ntBASIC21.13■□□□□ 0.97
Slc6a4Q60857 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a4Q60857 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a4Q60857 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.11■□□□□ 0.97
Slc6a4Q60857 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a4Q60857 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Gm45417-201ENSMUST00000209533 758 ntBASIC21.1■□□□□ 0.97
Slc6a4Q60857 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc6a4Q60857 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.09■□□□□ 0.97
Slc6a4Q60857 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Slc6a4Q60857 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.09■□□□□ 0.97
Slc6a4Q60857 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a4Q60857 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
Slc6a4Q60857 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a4Q60857 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a4Q60857 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a4Q60857 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a4Q60857 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a4Q60857 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.08■□□□□ 0.96
Slc6a4Q60857 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Slc6a4Q60857 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a4Q60857 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a4Q60857 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a4Q60857 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a4Q60857 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.06■□□□□ 0.96
Slc6a4Q60857 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a4Q60857 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a4Q60857 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.05■□□□□ 0.96
Slc6a4Q60857 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.05■□□□□ 0.96
Slc6a4Q60857 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a4Q60857 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a4Q60857 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a4Q60857 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slc6a4Q60857 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms