Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl6Q505G4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl6Q505G4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rtl6Q505G4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl6Q505G4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl6Q505G4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl6Q505G4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl6Q505G4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rtl6Q505G4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rtl6Q505G4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl6Q505G4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl6Q505G4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Rtl6Q505G4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl6Q505G4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl6Q505G4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.45■□□□□ 0.38
Rtl6Q505G4 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.45■□□□□ 0.38
Rtl6Q505G4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.44■□□□□ 0.38
Rtl6Q505G4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.44■□□□□ 0.38
Rtl6Q505G4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl6Q505G4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl6Q505G4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl6Q505G4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.42■□□□□ 0.38
Rtl6Q505G4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl6Q505G4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
Rtl6Q505G4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl6Q505G4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rtl6Q505G4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl6Q505G4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.4■□□□□ 0.38
Rtl6Q505G4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl6Q505G4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rtl6Q505G4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl6Q505G4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl6Q505G4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rtl6Q505G4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rtl6Q505G4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl6Q505G4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl6Q505G4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtl6Q505G4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl6Q505G4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtl6Q505G4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rtl6Q505G4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl6Q505G4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl6Q505G4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl6Q505G4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl6Q505G4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rtl6Q505G4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.37■□□□□ 0.37
Rtl6Q505G4 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.37■□□□□ 0.37
Rtl6Q505G4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl6Q505G4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl6Q505G4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.36■□□□□ 0.37
Rtl6Q505G4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.36■□□□□ 0.37
Rtl6Q505G4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl6Q505G4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl6Q505G4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms