Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cks1brtQ3UNC9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks1brtQ3UNC9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks1brtQ3UNC9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks1brtQ3UNC9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks1brtQ3UNC9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cks1brtQ3UNC9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Gm37136-201ENSMUST00000194368 194 ntBASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cks1brtQ3UNC9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 255.5 ms