Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smu1Q3UKJ7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smu1Q3UKJ7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smu1Q3UKJ7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smu1Q3UKJ7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smu1Q3UKJ7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smu1Q3UKJ7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smu1Q3UKJ7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smu1Q3UKJ7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smu1Q3UKJ7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.67■□□□□ 0.74
Smu1Q3UKJ7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smu1Q3UKJ7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smu1Q3UKJ7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smu1Q3UKJ7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Smu1Q3UKJ7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smu1Q3UKJ7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smu1Q3UKJ7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms