Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Mir7075-201ENSMUST00000184187 82 ntBASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Gm7143-201ENSMUST00000222811 859 ntBASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnrc6aQ3UHK8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnrc6aQ3UHK8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tnrc6aQ3UHK8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnrc6aQ3UHK8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnrc6aQ3UHK8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnrc6aQ3UHK8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnrc6aQ3UHK8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tnrc6aQ3UHK8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tnrc6aQ3UHK8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnrc6aQ3UHK8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.24■□□□□ 0.67
Tnrc6aQ3UHK8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnrc6aQ3UHK8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Spcs1-204ENSMUST00000226782 949 ntBASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tnrc6aQ3UHK8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.21■□□□□ 0.67
Tnrc6aQ3UHK8 Gm43530-201ENSMUST00000195920 274 ntBASIC19.21■□□□□ 0.67
Tnrc6aQ3UHK8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Tnrc6aQ3UHK8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnrc6aQ3UHK8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Tnrc6aQ3UHK8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc6aQ3UHK8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc6aQ3UHK8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc6aQ3UHK8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc6aQ3UHK8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tnrc6aQ3UHK8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc6aQ3UHK8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms