Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cops9Q3U898 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops9Q3U898 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops9Q3U898 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops9Q3U898 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops9Q3U898 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cops9Q3U898 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cops9Q3U898 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cops9Q3U898 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.14□□□□□ -0.15
Cops9Q3U898 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.14□□□□□ -0.15
Cops9Q3U898 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cops9Q3U898 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cops9Q3U898 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops9Q3U898 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cops9Q3U898 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cops9Q3U898 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cops9Q3U898 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cops9Q3U898 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.13□□□□□ -0.15
Cops9Q3U898 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.13□□□□□ -0.15
Cops9Q3U898 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops9Q3U898 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.12□□□□□ -0.15
Cops9Q3U898 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.12□□□□□ -0.15
Cops9Q3U898 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops9Q3U898 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cops9Q3U898 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops9Q3U898 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cops9Q3U898 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.1□□□□□ -0.15
Cops9Q3U898 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cops9Q3U898 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cops9Q3U898 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Cops9Q3U898 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops9Q3U898 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cops9Q3U898 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cops9Q3U898 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cops9Q3U898 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms