Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scn1bP97952 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scn1bP97952 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1bP97952 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1bP97952 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1bP97952 Gm6311-201ENSMUST00000073790 878 ntBASIC18.69■□□□□ 0.58
Scn1bP97952 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1bP97952 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1bP97952 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn1bP97952 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn1bP97952 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scn1bP97952 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn1bP97952 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1bP97952 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1bP97952 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scn1bP97952 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scn1bP97952 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1bP97952 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn1bP97952 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scn1bP97952 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.67■□□□□ 0.58
Scn1bP97952 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1bP97952 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.66■□□□□ 0.58
Scn1bP97952 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1bP97952 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1bP97952 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1bP97952 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scn1bP97952 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn1bP97952 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Scn1bP97952 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn1bP97952 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn1bP97952 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.65■□□□□ 0.58
Scn1bP97952 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scn1bP97952 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.65■□□□□ 0.58
Scn1bP97952 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn1bP97952 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn1bP97952 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1bP97952 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.64■□□□□ 0.57
Scn1bP97952 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1bP97952 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1bP97952 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.64■□□□□ 0.57
Scn1bP97952 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.64■□□□□ 0.57
Scn1bP97952 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1bP97952 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scn1bP97952 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1bP97952 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn1bP97952 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn1bP97952 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn1bP97952 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn1bP97952 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scn1bP97952 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn1bP97952 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.62■□□□□ 0.57
Scn1bP97952 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn1bP97952 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1bP97952 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1bP97952 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Scn1bP97952 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1bP97952 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1bP97952 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1bP97952 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.6■□□□□ 0.57
Scn1bP97952 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Scn1bP97952 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1bP97952 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1bP97952 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1bP97952 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms