Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh6P97326 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cdh6P97326 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh6P97326 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh6P97326 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh6P97326 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh6P97326 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh6P97326 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdh6P97326 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cdh6P97326 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh6P97326 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cdh6P97326 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh6P97326 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh6P97326 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh6P97326 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdh6P97326 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh6P97326 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh6P97326 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh6P97326 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh6P97326 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh6P97326 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh6P97326 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh6P97326 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh6P97326 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh6P97326 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh6P97326 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh6P97326 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.83■□□□□ 0.92
Cdh6P97326 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh6P97326 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh6P97326 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh6P97326 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh6P97326 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh6P97326 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.82■□□□□ 0.92
Cdh6P97326 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cdh6P97326 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.82■□□□□ 0.92
Cdh6P97326 Gm22238-201ENSMUST00000175222 88 ntBASIC20.82■□□□□ 0.92
Cdh6P97326 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.82■□□□□ 0.92
Cdh6P97326 Gm7143-201ENSMUST00000222811 859 ntBASIC20.82■□□□□ 0.92
Cdh6P97326 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh6P97326 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh6P97326 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cdh6P97326 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
Cdh6P97326 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh6P97326 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.8■□□□□ 0.92
Cdh6P97326 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdh6P97326 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.8■□□□□ 0.92
Cdh6P97326 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.8■□□□□ 0.92
Cdh6P97326 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdh6P97326 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh6P97326 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cdh6P97326 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cdh6P97326 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh6P97326 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cdh6P97326 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdh6P97326 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Cdh6P97326 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cdh6P97326 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh6P97326 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh6P97326 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh6P97326 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh6P97326 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cdh6P97326 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh6P97326 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh6P97326 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.76■□□□□ 0.91
Cdh6P97326 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh6P97326 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdh6P97326 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdh6P97326 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdh6P97326 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cdh6P97326 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh6P97326 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdh6P97326 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdh6P97326 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.75■□□□□ 0.91
Cdh6P97326 Gm9870-201ENSMUST00000063874 645 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 292.2 ms