Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim43bP86448 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43bP86448 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim43bP86448 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43bP86448 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43bP86448 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43bP86448 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43bP86448 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43bP86448 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim43bP86448 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim43bP86448 Iqck-206ENSMUST00000208658 2891 ntBASIC21.02■□□□□ 0.95
Trim43bP86448 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim43bP86448 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.01■□□□□ 0.95
Trim43bP86448 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim43bP86448 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43bP86448 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43bP86448 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.01■□□□□ 0.95
Trim43bP86448 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim43bP86448 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim43bP86448 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim43bP86448 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43bP86448 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43bP86448 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43bP86448 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21■□□□□ 0.95
Trim43bP86448 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21■□□□□ 0.95
Trim43bP86448 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim43bP86448 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43bP86448 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim43bP86448 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim43bP86448 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Gm15820-201ENSMUST00000201566 728 ntBASIC20.99■□□□□ 0.95
Trim43bP86448 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim43bP86448 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim43bP86448 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim43bP86448 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43bP86448 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim43bP86448 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43bP86448 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim43bP86448 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43bP86448 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim43bP86448 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim43bP86448 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim43bP86448 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim43bP86448 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim43bP86448 Gm10232-201ENSMUST00000089221 720 ntBASIC20.97■□□□□ 0.95
Trim43bP86448 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim43bP86448 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim43bP86448 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43bP86448 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43bP86448 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim43bP86448 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43bP86448 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim43bP86448 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43bP86448 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim43bP86448 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim43bP86448 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43bP86448 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43bP86448 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43bP86448 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43bP86448 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43bP86448 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim43bP86448 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43bP86448 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.93■□□□□ 0.94
Trim43bP86448 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43bP86448 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.93■□□□□ 0.94
Trim43bP86448 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms