Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pdlim4P70271 Gm45102-201ENSMUST00000207427 857 ntBASIC17.03■□□□□ 0.32
Pdlim4P70271 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim4P70271 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.02■□□□□ 0.32
Pdlim4P70271 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Gm14117-201ENSMUST00000122417 843 ntBASIC17.02■□□□□ 0.32
Pdlim4P70271 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.02■□□□□ 0.32
Pdlim4P70271 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.02■□□□□ 0.32
Pdlim4P70271 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim4P70271 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pdlim4P70271 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim4P70271 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pdlim4P70271 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17■□□□□ 0.31
Pdlim4P70271 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17■□□□□ 0.31
Pdlim4P70271 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17■□□□□ 0.31
Pdlim4P70271 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17■□□□□ 0.31
Pdlim4P70271 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17■□□□□ 0.31
Pdlim4P70271 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim4P70271 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim4P70271 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pdlim4P70271 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim4P70271 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.98■□□□□ 0.31
Pdlim4P70271 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim4P70271 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim4P70271 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.98■□□□□ 0.31
Pdlim4P70271 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim4P70271 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim4P70271 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim4P70271 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.97■□□□□ 0.31
Pdlim4P70271 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim4P70271 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim4P70271 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim4P70271 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim4P70271 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim4P70271 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim4P70271 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim4P70271 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.96■□□□□ 0.31
Pdlim4P70271 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim4P70271 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim4P70271 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pdlim4P70271 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.96■□□□□ 0.3
Pdlim4P70271 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Pdlim4P70271 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim4P70271 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.95■□□□□ 0.3
Pdlim4P70271 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim4P70271 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim4P70271 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim4P70271 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim4P70271 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pdlim4P70271 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Pdlim4P70271 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pdlim4P70271 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim4P70271 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.94■□□□□ 0.3
Pdlim4P70271 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim4P70271 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pdlim4P70271 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim4P70271 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim4P70271 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim4P70271 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim4P70271 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim4P70271 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim4P70271 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim4P70271 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim4P70271 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms