Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cldn18P56857 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.45■□□□□ 0.54
Cldn18P56857 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.45■□□□□ 0.54
Cldn18P56857 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
Cldn18P56857 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cldn18P56857 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cldn18P56857 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn18P56857 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Cldn18P56857 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.44■□□□□ 0.54
Cldn18P56857 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn18P56857 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn18P56857 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.44■□□□□ 0.54
Cldn18P56857 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cldn18P56857 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn18P56857 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.44■□□□□ 0.54
Cldn18P56857 Gm7143-201ENSMUST00000222811 859 ntBASIC18.44■□□□□ 0.54
Cldn18P56857 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn18P56857 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn18P56857 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn18P56857 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn18P56857 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn18P56857 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn18P56857 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.41■□□□□ 0.54
Cldn18P56857 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.41■□□□□ 0.54
Cldn18P56857 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Cldn18P56857 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.41■□□□□ 0.54
Cldn18P56857 Gm9870-201ENSMUST00000063874 645 ntBASIC18.41■□□□□ 0.54
Cldn18P56857 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn18P56857 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.4■□□□□ 0.54
Cldn18P56857 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.4■□□□□ 0.54
Cldn18P56857 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn18P56857 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn18P56857 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn18P56857 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn18P56857 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cldn18P56857 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn18P56857 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Cldn18P56857 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cldn18P56857 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cldn18P56857 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn18P56857 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.38■□□□□ 0.53
Cldn18P56857 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cldn18P56857 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn18P56857 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn18P56857 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn18P56857 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.37■□□□□ 0.53
Cldn18P56857 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn18P56857 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn18P56857 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn18P56857 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn18P56857 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cldn18P56857 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.36■□□□□ 0.53
Cldn18P56857 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.36■□□□□ 0.53
Cldn18P56857 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.36■□□□□ 0.53
Cldn18P56857 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn18P56857 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.36■□□□□ 0.53
Cldn18P56857 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Cldn18P56857 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn18P56857 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms