Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.76■□□□□ 0.75
Cdkn2bP55271 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn2bP55271 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkn2bP55271 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.74■□□□□ 0.75
Cdkn2bP55271 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.74■□□□□ 0.75
Cdkn2bP55271 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkn2bP55271 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.73■□□□□ 0.75
Cdkn2bP55271 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkn2bP55271 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.72■□□□□ 0.75
Cdkn2bP55271 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkn2bP55271 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkn2bP55271 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkn2bP55271 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdkn2bP55271 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdkn2bP55271 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdkn2bP55271 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkn2bP55271 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkn2bP55271 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cdkn2bP55271 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdkn2bP55271 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdkn2bP55271 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkn2bP55271 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.67■□□□□ 0.74
Cdkn2bP55271 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkn2bP55271 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkn2bP55271 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdkn2bP55271 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkn2bP55271 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cdkn2bP55271 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdkn2bP55271 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkn2bP55271 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms