Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.92■□□□□ 0.62
Nkx2-2P42586 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-2P42586 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-2P42586 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-2P42586 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-2P42586 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.91■□□□□ 0.62
Nkx2-2P42586 Etf1-202ENSMUST00000180351 108 ntBASIC18.91■□□□□ 0.62
Nkx2-2P42586 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-2P42586 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-2P42586 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.9■□□□□ 0.62
Nkx2-2P42586 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-2P42586 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-2P42586 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nkx2-2P42586 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-2P42586 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.89■□□□□ 0.61
Nkx2-2P42586 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-2P42586 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nkx2-2P42586 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nkx2-2P42586 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nkx2-2P42586 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-2P42586 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx2-2P42586 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Gm7143-201ENSMUST00000222811 859 ntBASIC18.87■□□□□ 0.61
Nkx2-2P42586 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-2P42586 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-2P42586 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-2P42586 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-2P42586 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-2P42586 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-2P42586 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-2P42586 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Gm45102-201ENSMUST00000207427 857 ntBASIC18.85■□□□□ 0.61
Nkx2-2P42586 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-2P42586 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-2P42586 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nkx2-2P42586 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nkx2-2P42586 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-2P42586 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-2P42586 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nkx2-2P42586 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-2P42586 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Rps24-207ENSMUST00000224568 714 ntBASIC18.82■□□□□ 0.6
Nkx2-2P42586 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-2P42586 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms