Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf9P41274 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf9P41274 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf9P41274 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf9P41274 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfsf9P41274 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfsf9P41274 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tnfsf9P41274 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf9P41274 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfsf9P41274 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfsf9P41274 Gm27454-201ENSMUST00000185090 204 ntBASIC19.64■□□□□ 0.73
Tnfsf9P41274 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tnfsf9P41274 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfsf9P41274 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfsf9P41274 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfsf9P41274 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.64■□□□□ 0.73
Tnfsf9P41274 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.64■□□□□ 0.73
Tnfsf9P41274 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.63■□□□□ 0.73
Tnfsf9P41274 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tnfsf9P41274 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.63■□□□□ 0.73
Tnfsf9P41274 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfsf9P41274 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Tnfsf9P41274 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
Tnfsf9P41274 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfsf9P41274 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.61■□□□□ 0.73
Tnfsf9P41274 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf9P41274 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf9P41274 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.59■□□□□ 0.73
Tnfsf9P41274 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf9P41274 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfsf9P41274 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfsf9P41274 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfsf9P41274 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.58■□□□□ 0.73
Tnfsf9P41274 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfsf9P41274 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.58■□□□□ 0.72
Tnfsf9P41274 Gm45417-201ENSMUST00000209533 758 ntBASIC19.58■□□□□ 0.72
Tnfsf9P41274 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfsf9P41274 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.58■□□□□ 0.72
Tnfsf9P41274 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Tnfsf9P41274 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfsf9P41274 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.57■□□□□ 0.72
Tnfsf9P41274 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.57■□□□□ 0.72
Tnfsf9P41274 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms