Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.67■□□□□ 0.9
Traf2P39429 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.67■□□□□ 0.9
Traf2P39429 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Traf2P39429 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Traf2P39429 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.66■□□□□ 0.9
Traf2P39429 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Traf2P39429 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Traf2P39429 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Traf2P39429 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Traf2P39429 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Traf2P39429 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Traf2P39429 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Traf2P39429 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf2P39429 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf2P39429 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.64■□□□□ 0.89
Traf2P39429 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.64■□□□□ 0.89
Traf2P39429 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf2P39429 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf2P39429 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Traf2P39429 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf2P39429 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Traf2P39429 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Traf2P39429 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf2P39429 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.63■□□□□ 0.89
Traf2P39429 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.63■□□□□ 0.89
Traf2P39429 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf2P39429 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf2P39429 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Traf2P39429 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf2P39429 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.62■□□□□ 0.89
Traf2P39429 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf2P39429 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
Traf2P39429 Gm22238-201ENSMUST00000175222 88 ntBASIC20.61■□□□□ 0.89
Traf2P39429 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.61■□□□□ 0.89
Traf2P39429 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Traf2P39429 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf2P39429 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Traf2P39429 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf2P39429 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Traf2P39429 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.6■□□□□ 0.89
Traf2P39429 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf2P39429 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Traf2P39429 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf2P39429 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.6■□□□□ 0.89
Traf2P39429 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.6■□□□□ 0.89
Traf2P39429 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf2P39429 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Traf2P39429 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.6■□□□□ 0.89
Traf2P39429 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Traf2P39429 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Traf2P39429 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Traf2P39429 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.58■□□□□ 0.89
Traf2P39429 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Traf2P39429 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Traf2P39429 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.58■□□□□ 0.89
Traf2P39429 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Traf2P39429 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf2P39429 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf2P39429 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf2P39429 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.57■□□□□ 0.88
Traf2P39429 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Traf2P39429 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.57■□□□□ 0.88
Traf2P39429 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Traf2P39429 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf2P39429 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms