Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.71■□□□□ 0.91
Gja4P28235 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gja4P28235 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gja4P28235 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gja4P28235 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.7■□□□□ 0.91
Gja4P28235 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gja4P28235 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.7■□□□□ 0.9
Gja4P28235 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gja4P28235 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gja4P28235 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja4P28235 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja4P28235 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja4P28235 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
Gja4P28235 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.69■□□□□ 0.9
Gja4P28235 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Gja4P28235 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.69■□□□□ 0.9
Gja4P28235 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.69■□□□□ 0.9
Gja4P28235 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gja4P28235 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.69■□□□□ 0.9
Gja4P28235 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.68■□□□□ 0.9
Gja4P28235 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja4P28235 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja4P28235 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja4P28235 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.67■□□□□ 0.9
Gja4P28235 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.67■□□□□ 0.9
Gja4P28235 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.67■□□□□ 0.9
Gja4P28235 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gja4P28235 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja4P28235 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja4P28235 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja4P28235 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja4P28235 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gja4P28235 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gja4P28235 Spcs1-204ENSMUST00000226782 949 ntBASIC20.66■□□□□ 0.9
Gja4P28235 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja4P28235 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Gja4P28235 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.65■□□□□ 0.9
Gja4P28235 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja4P28235 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gja4P28235 Gm5874-201ENSMUST00000096101 508 ntBASIC20.65■□□□□ 0.9
Gja4P28235 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja4P28235 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.64■□□□□ 0.9
Gja4P28235 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gja4P28235 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Gja4P28235 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.64■□□□□ 0.89
Gja4P28235 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja4P28235 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Gja4P28235 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja4P28235 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
Gja4P28235 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja4P28235 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gja4P28235 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gja4P28235 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gja4P28235 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gja4P28235 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.62■□□□□ 0.89
Gja4P28235 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.62■□□□□ 0.89
Gja4P28235 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja4P28235 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gja4P28235 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja4P28235 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja4P28235 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja4P28235 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.62■□□□□ 0.89
Gja4P28235 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja4P28235 Gm26833-201ENSMUST00000180899 440 ntBASIC20.61■□□□□ 0.89
Gja4P28235 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja4P28235 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gja4P28235 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja4P28235 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gja4P28235 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja4P28235 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja4P28235 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.61■□□□□ 0.89
Gja4P28235 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gja4P28235 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja4P28235 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja4P28235 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.6■□□□□ 0.89
Gja4P28235 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja4P28235 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja4P28235 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms