Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.36■□□□□ 0.53
Cd48P18181 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd48P18181 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd48P18181 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd48P18181 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cd48P18181 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd48P18181 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.34■□□□□ 0.53
Cd48P18181 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd48P18181 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.34■□□□□ 0.53
Cd48P18181 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.34■□□□□ 0.53
Cd48P18181 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.34■□□□□ 0.53
Cd48P18181 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd48P18181 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.33■□□□□ 0.52
Cd48P18181 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd48P18181 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd48P18181 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd48P18181 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd48P18181 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd48P18181 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cd48P18181 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cd48P18181 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cd48P18181 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd48P18181 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd48P18181 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd48P18181 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd48P18181 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd48P18181 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd48P18181 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd48P18181 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd48P18181 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cd48P18181 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.3■□□□□ 0.52
Cd48P18181 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cd48P18181 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd48P18181 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.3■□□□□ 0.52
Cd48P18181 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd48P18181 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.29■□□□□ 0.52
Cd48P18181 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cd48P18181 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd48P18181 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.28■□□□□ 0.52
Cd48P18181 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.28■□□□□ 0.52
Cd48P18181 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.28■□□□□ 0.52
Cd48P18181 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.28■□□□□ 0.52
Cd48P18181 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd48P18181 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd48P18181 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cd48P18181 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd48P18181 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cd48P18181 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cd48P18181 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.27■□□□□ 0.52
Cd48P18181 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd48P18181 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd48P18181 Gm45444-201ENSMUST00000211394 898 ntBASIC18.27■□□□□ 0.52
Cd48P18181 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd48P18181 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd48P18181 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cd48P18181 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd48P18181 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cd48P18181 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd48P18181 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.26■□□□□ 0.51
Cd48P18181 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd48P18181 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd48P18181 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms