Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccl3P10855 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccl3P10855 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccl3P10855 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Ccl3P10855 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccl3P10855 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl3P10855 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.33■□□□□ 0.52
Ccl3P10855 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ccl3P10855 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl3P10855 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl3P10855 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl3P10855 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl3P10855 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl3P10855 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.32■□□□□ 0.52
Ccl3P10855 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl3P10855 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl3P10855 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ccl3P10855 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl3P10855 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl3P10855 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl3P10855 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccl3P10855 Gm43060-201ENSMUST00000200621 289 ntBASIC18.3■□□□□ 0.52
Ccl3P10855 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl3P10855 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl3P10855 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccl3P10855 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl3P10855 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl3P10855 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl3P10855 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl3P10855 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl3P10855 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.28■□□□□ 0.52
Ccl3P10855 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccl3P10855 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Ccl3P10855 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccl3P10855 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl3P10855 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.27■□□□□ 0.51
Ccl3P10855 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccl3P10855 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ccl3P10855 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl3P10855 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl3P10855 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl3P10855 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl3P10855 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.26■□□□□ 0.51
Ccl3P10855 Gm40848-201ENSMUST00000221998 324 ntBASIC18.26■□□□□ 0.51
Ccl3P10855 Gm10493-201ENSMUST00000097270 612 ntBASIC18.26■□□□□ 0.51
Ccl3P10855 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl3P10855 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl3P10855 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccl3P10855 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
Ccl3P10855 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccl3P10855 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccl3P10855 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Ccl3P10855 Gm7291-201ENSMUST00000199147 382 ntBASIC18.25■□□□□ 0.51
Ccl3P10855 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ccl3P10855 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccl3P10855 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccl3P10855 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl3P10855 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl3P10855 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccl3P10855 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl3P10855 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl3P10855 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl3P10855 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccl3P10855 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl3P10855 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl3P10855 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccl3P10855 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl3P10855 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Ccl3P10855 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccl3P10855 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.23■□□□□ 0.51
Ccl3P10855 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ccl3P10855 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms