Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Gm15546-201ENSMUST00000122095 826 ntBASIC16.74■□□□□ 0.27
P04940 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.74■□□□□ 0.27
P04940 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P04940 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
P04940 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.73■□□□□ 0.27
P04940 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P04940 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04940 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04940 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04940 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.72■□□□□ 0.27
P04940 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.72■□□□□ 0.27
P04940 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
P04940 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P04940 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
P04940 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.71■□□□□ 0.27
P04940 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P04940 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
P04940 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.71■□□□□ 0.26
P04940 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.7■□□□□ 0.26
P04940 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.7■□□□□ 0.26
P04940 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.7■□□□□ 0.26
P04940 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P04940 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P04940 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04940 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04940 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04940 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
P04940 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.69■□□□□ 0.26
P04940 Gm7143-201ENSMUST00000222811 859 ntBASIC16.69■□□□□ 0.26
P04940 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P04940 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04940 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.69■□□□□ 0.26
P04940 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04940 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.68■□□□□ 0.26
P04940 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
P04940 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
P04940 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04940 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04940 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04940 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P04940 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P04940 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04940 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P04940 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04940 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04940 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04940 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.66■□□□□ 0.26
P04940 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04940 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04940 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.66■□□□□ 0.26
P04940 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
P04940 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P04940 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms