Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igh-VJ558P01758 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igh-VJ558P01758 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igh-VJ558P01758 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igh-VJ558P01758 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igh-VJ558P01758 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igh-VJ558P01758 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Igh-VJ558P01758 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Igh-VJ558P01758 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igh-VJ558P01758 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igh-VJ558P01758 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Gm40881-201ENSMUST00000223397 166 ntBASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igh-VJ558P01758 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igh-VJ558P01758 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Gm5812-201ENSMUST00000061073 957 ntBASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igh-VJ558P01758 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igh-VJ558P01758 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igh-VJ558P01758 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igh-VJ558P01758 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms