Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Best1O88870 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.9■□□□□ 0.78
Best1O88870 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.9■□□□□ 0.78
Best1O88870 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.9■□□□□ 0.78
Best1O88870 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Best1O88870 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Best1O88870 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Best1O88870 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Best1O88870 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Best1O88870 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Best1O88870 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Best1O88870 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.88■□□□□ 0.77
Best1O88870 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Best1O88870 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Best1O88870 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Best1O88870 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Best1O88870 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Best1O88870 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.86■□□□□ 0.77
Best1O88870 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Best1O88870 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Best1O88870 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.85■□□□□ 0.77
Best1O88870 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Best1O88870 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Best1O88870 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Best1O88870 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Best1O88870 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Best1O88870 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Best1O88870 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Best1O88870 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Best1O88870 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Best1O88870 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.84■□□□□ 0.77
Best1O88870 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.84■□□□□ 0.77
Best1O88870 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Best1O88870 Gm45417-201ENSMUST00000209533 758 ntBASIC19.84■□□□□ 0.77
Best1O88870 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Best1O88870 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Best1O88870 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Best1O88870 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Best1O88870 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Best1O88870 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Best1O88870 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Best1O88870 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Best1O88870 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Best1O88870 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Best1O88870 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Best1O88870 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.83■□□□□ 0.76
Best1O88870 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Best1O88870 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Best1O88870 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.82■□□□□ 0.76
Best1O88870 Gm43137-201ENSMUST00000198052 594 ntBASIC19.82■□□□□ 0.76
Best1O88870 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.82■□□□□ 0.76
Best1O88870 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Best1O88870 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Best1O88870 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Best1O88870 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Best1O88870 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.81■□□□□ 0.76
Best1O88870 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Best1O88870 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Best1O88870 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Best1O88870 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Best1O88870 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Best1O88870 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Best1O88870 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Best1O88870 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Best1O88870 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.8■□□□□ 0.76
Best1O88870 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.8■□□□□ 0.76
Best1O88870 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Best1O88870 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.8■□□□□ 0.76
Best1O88870 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Best1O88870 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Best1O88870 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Best1O88870 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Best1O88870 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Best1O88870 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Best1O88870 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Best1O88870 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Best1O88870 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Best1O88870 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Best1O88870 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Best1O88870 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Best1O88870 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Best1O88870 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Best1O88870 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms