Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc179J3QM76 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Gm11847-201ENSMUST00000125165 1119 ntBASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Gm45444-201ENSMUST00000211394 898 ntBASIC12.97□□□□□ -0.33
Ccdc179J3QM76 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Gm5921-201ENSMUST00000075898 882 ntBASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Haglr-201ENSMUST00000100000 2085 ntBASIC12.97□□□□□ -0.33
Ccdc179J3QM76 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.96□□□□□ -0.33
Ccdc179J3QM76 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc179J3QM76 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc179J3QM76 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Ccdc179J3QM76 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc179J3QM76 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc179J3QM76 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc179J3QM76 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc179J3QM76 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc179J3QM76 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms