Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4lE9Q2N0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.44■□□□□ 0.38
Cpsf4lE9Q2N0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4lE9Q2N0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4lE9Q2N0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf4lE9Q2N0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf4lE9Q2N0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf4lE9Q2N0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Gm22238-201ENSMUST00000175222 88 ntBASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
Cpsf4lE9Q2N0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf4lE9Q2N0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf4lE9Q2N0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf4lE9Q2N0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf4lE9Q2N0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4lE9Q2N0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Cpsf4lE9Q2N0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.36■□□□□ 0.37
Cpsf4lE9Q2N0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cpsf4lE9Q2N0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf4lE9Q2N0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf4lE9Q2N0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cpsf4lE9Q2N0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4lE9Q2N0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf4lE9Q2N0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms