Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc6a21A0A1B0GSD2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Slc6a21A0A1B0GSD2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a21A0A1B0GSD2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a21A0A1B0GSD2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc6a21A0A1B0GSD2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Slc6a21A0A1B0GSD2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Slc6a21A0A1B0GSD2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc6a21A0A1B0GSD2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Gm43060-201ENSMUST00000200621 289 ntBASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Slc6a21A0A1B0GSD2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc6a21A0A1B0GSD2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Gm10493-201ENSMUST00000097270 612 ntBASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc6a21A0A1B0GSD2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 Gm7291-201ENSMUST00000199147 382 ntBASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.51■■□□□ 1.19
Slc6a21A0A1B0GSD2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Slc6a21A0A1B0GSD2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Slc6a21A0A1B0GSD2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
Slc6a21A0A1B0GSD2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.49■■□□□ 1.19
Slc6a21A0A1B0GSD2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Slc6a21A0A1B0GSD2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc6a21A0A1B0GSD2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc6a21A0A1B0GSD2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.46■■□□□ 1.19
Slc6a21A0A1B0GSD2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a21A0A1B0GSD2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.46■■□□□ 1.19
Slc6a21A0A1B0GSD2 Gm26571-201ENSMUST00000181399 666 ntBASIC22.46■■□□□ 1.19
Slc6a21A0A1B0GSD2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a21A0A1B0GSD2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc6a21A0A1B0GSD2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Slc6a21A0A1B0GSD2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.44■■□□□ 1.18
Slc6a21A0A1B0GSD2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a21A0A1B0GSD2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a21A0A1B0GSD2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc6a21A0A1B0GSD2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Slc6a21A0A1B0GSD2 Gm42569-201ENSMUST00000200539 472 ntBASIC22.43■■□□□ 1.18
Slc6a21A0A1B0GSD2 Gm42642-201ENSMUST00000200683 355 ntBASIC22.43■■□□□ 1.18
Slc6a21A0A1B0GSD2 Gm40848-201ENSMUST00000221998 324 ntBASIC22.43■■□□□ 1.18
Slc6a21A0A1B0GSD2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms