Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Igkv6-25A0A140T8N7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Igkv6-25A0A140T8N7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-25A0A140T8N7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-25A0A140T8N7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv6-25A0A140T8N7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Igkv6-25A0A140T8N7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv6-25A0A140T8N7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv6-25A0A140T8N7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.34■□□□□ 0.69
Igkv6-25A0A140T8N7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.34■□□□□ 0.69
Igkv6-25A0A140T8N7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv6-25A0A140T8N7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv6-25A0A140T8N7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Igkv6-25A0A140T8N7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.33■□□□□ 0.68
Igkv6-25A0A140T8N7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.33■□□□□ 0.68
Igkv6-25A0A140T8N7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Igkv6-25A0A140T8N7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-25A0A140T8N7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-25A0A140T8N7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.32■□□□□ 0.68
Igkv6-25A0A140T8N7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv6-25A0A140T8N7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv6-25A0A140T8N7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.29■□□□□ 0.68
Igkv6-25A0A140T8N7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.28■□□□□ 0.68
Igkv6-25A0A140T8N7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Igkv6-25A0A140T8N7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Igkv6-25A0A140T8N7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv6-25A0A140T8N7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.28■□□□□ 0.68
Igkv6-25A0A140T8N7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv6-25A0A140T8N7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms