Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.32■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms