Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Gm7143-201ENSMUST00000222811 859 ntBASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdh7A0A0A6YY83 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh7A0A0A6YY83 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh7A0A0A6YY83 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh7A0A0A6YY83 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh7A0A0A6YY83 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 Gm45102-201ENSMUST00000207427 857 ntBASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh7A0A0A6YY83 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdh7A0A0A6YY83 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.99
Pcdh7A0A0A6YY83 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Rps24-207ENSMUST00000224568 714 ntBASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh7A0A0A6YY83 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh7A0A0A6YY83 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh7A0A0A6YY83 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh7A0A0A6YY83 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh7A0A0A6YY83 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh7A0A0A6YY83 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh7A0A0A6YY83 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh7A0A0A6YY83 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Pcdh7A0A0A6YY83 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdh7A0A0A6YY83 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.14■□□□□ 0.98
Pcdh7A0A0A6YY83 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh7A0A0A6YY83 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh7A0A0A6YY83 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh7A0A0A6YY83 Gm14117-201ENSMUST00000122417 843 ntBASIC21.14■□□□□ 0.97
Pcdh7A0A0A6YY83 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdh7A0A0A6YY83 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh7A0A0A6YY83 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh7A0A0A6YY83 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Gm22238-201ENSMUST00000175222 88 ntBASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdh7A0A0A6YY83 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdh7A0A0A6YY83 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh7A0A0A6YY83 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh7A0A0A6YY83 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdh7A0A0A6YY83 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms