Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-1A0A075B606 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-1A0A075B606 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13d-1A0A075B606 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trav13d-1A0A075B606 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.96□□□□□ -0.01
Trav13d-1A0A075B606 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13d-1A0A075B606 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13d-1A0A075B606 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13d-1A0A075B606 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13d-1A0A075B606 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Gm12922-201ENSMUST00000120626 809 ntBASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-1A0A075B606 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms