Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Smco3Q8BQM7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Gm44958-201ENSMUST00000203734 736 ntBASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smco3Q8BQM7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm12036-201ENSMUST00000120008 530 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms