Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-4Q9EQM3 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm24809-201ENSMUST00000175318 271 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm9162-201ENSMUST00000182081 991 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm43854-201ENSMUST00000200418 394 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm45085-201ENSMUST00000209100 441 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.11□□□□□ -0.47
Nkx2-4Q9EQM3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm16030-201ENSMUST00000159098 603 ntBASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm11942-201ENSMUST00000180255 345 ntBASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm37782-201ENSMUST00000194879 678 ntBASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms